Versions Compared

Old Version 2

changes.mady.by.user Jo Ripoll

Saved on

compared with

New Version Current

changes.mady.by.user Jo Ripoll

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Live Search
spaceKeyEUDR
additionalpage excerpt
placeholderSearch this space

On this page

Table of Contents

In this section

Child pages (Children Display)
pageJATS/NLM XML Export

In a standard eXtyles JATS XML export, a reference list can contain a single title paragraph (e.g., "Reference Head") and references only.

Additional paragraph styles can be used to tag introductions to a reference list or annotation paragraphs for a specific reference.

The “Reflist_Introduction” style may be used to style one or more paragraphs after a reference head and before the start of a reference list that introduce the reference list.

Warning

It may not be used at any other location in a reference list.

This differs from “Reference_Annotation” which is used to give additional information about specific references (typically in Review articles).

Note

For eXtyles JATS customer: If you need to subdivide a reference list with subheadings, introduce the list with a paragraph of text, or add annotations to explain the significance of particular references, you will require additional paragraph styles and alterations to the export filter.

For eXtyles Custom customers: Your style palette and export filters may have already been configured with the necessary paragraph styles to subdivide a reference list.

If you need additional paragraph styles and alterations to the export filter.; please contact eXtyles Support.

If your publication includes both a list of references that are cited in the document and a list of references that should be fully tagged by eXtyles processing but are not cited in the document (e.g., Further Reading), you can use a "References" style for cited references and a "Bibliography" style for references that are not cited.

Both styles must be used in the document for the Bibliography references to remain uncited throughout eXtyles processing.

Live Search
spaceKeyEUDR
placeholderSearch this space

In this section

Child pages (Children Display)pageJATS/NLM XML Export

Example 1: Reference Lists

Screenshot in Draft View of a processed reference list. For further description see the paragraph belowImage Added

Image description paragraph

which yields the following XML:

Code Block
<ref-list>
    <title>References</title>
    <ref id="r1">
        <label>1</label>
        <mixed-citation publication-type="standard">ANSI/NISO Z39.96-2015. <italic>JATS: Journal Article Tag Suite</italic>, version 1.1.1. Baltimore, MD: National Information Standards Organization, January 2015. Accessed 14 March 2016. <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://www.niso.org/apps/group_public/download.php/15933/z39_96-2015.pdf">http://www.niso.org/apps/group_public/download.php/15933/z39_96-2015.pdf</ext-link></mixed-citation>
    </ref>
    <ref id="r2">
        <label>2</label>
        <mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Rishi</surname><given-names>T.</given-names></name></person-group> &#x201C;<article-title>LaTeX to ePub</article-title>.&#x201D; <source>TUGboat</source> <volume>32</volume>, <issue>no. 3</issue> (<year>2011</year>): <fpage>266</fpage>&#x2013;<lpage>268</lpage>. Accessed 14 March 2016. <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://www.tug.org/TUGboat/tb32-3/tb102rishi.pdf">https://www.tug.org/TUGboat/tb32-3/tb102rishi.pdf</ext-link></mixed-citation>
    </ref>
    <ref id="r3">
        <label>3</label>
        <mixed-citation publication-type="web">Instituut-Lorentz. Einstein Papers. &#x201C;Einstein&#x2019;s 1914 Typescript.&#x201D; Einstein_1914_04. Accessed 14 March 2016. <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://www.lorentz.leidenuniv.nl/history/Einstein_archive/Einstein_1914_typescript/Pages/Einstein_1914_04.html">https://www.lorentz.leidenuniv.nl/history/Einstein_archive/Einstein_1914_typescript/Pages/Einstein_1914_04.html</ext-link></mixed-citation>
    </ref>
    <ref id="r4">
        <label>4</label>
        <mixed-citation publication-type="book">Wiesner, Jerome B. <italic>Vannevar Bush: 1890-1974</italic>. Washington DC, National Academy of Sciences, 1979. Accessed 23 March 2016. <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://www.nasonline.org/publications/biographical-memoirs/memoir-pdfs/bush-vannevar.pdf">http://www.nasonline.org/publications/biographical-memoirs/memoir-pdfs/bush-vannevar.pdf</ext-link></mixed-citation>
    </ref>
    <ref id="r5">
        <label>5</label>
        <mixed-citation publication-type="other">Vannevar Bush to Charles Dollard [letter], 5 January 1953, private collection.</mixed-citation>
    </ref>
    <ref id="r6">
        <label>6</label>
        <mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hofmann</surname><given-names>Karl H.</given-names></name><name><surname>Morris</surname><given-names>Sidney A.</given-names></name></person-group>. &#x201C;<article-title>Editors&#x2019; Cut: Managing Scholarly Journals in Mathematics and IT.</article-title>&#x201D; <source>Journal of Research and Practice in Information Technology</source> <volume>37</volume>, <issue>no 4</issue> (<year>2005</year>): <fpage>299</fpage>&#x2013;<lpage>309</lpage>. Accessed 14 March 2016. <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="https://www.acs.org.au/__data/assets/pdf_file/0007/15559/JRPIT37.4.299.pdf">https://www.acs.org.au/__data/assets/pdf_file/0007/15559/JRPIT37.4.299.pdf</ext-link></mixed-citation>
    </ref>
...
</ref-list>

Example 2: Further Reading

Image Added

Image description paragraph

which yields this XML:

Code Block
<ref-list>
    <title>Further Reading</title>
    <p>These publications provide further information about handling math in XML.</p>
    <ref id="r">
        <mixed-citation publication-type="confproc">Bahram, Sina, David MacDonald, and CB Averitt. &#x201C;Enabling Math on the Web, in Word &amp; PDF, Emerging Solutions and Overcoming Issues&#x201D; [draft conference session submission]. Annual International Technology and Persons with Disabilities Conference (CSUN), 2015. Accessed 14 March 2016. 
            <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://davidmacd.com/mathml/making-math-accessible-CSUN-2015L.pdf">http://davidmacd.com/mathml/making-math-accessible-CSUN-2015L.pdf</ext-link>
            <annotation>
                <p>This conference paper discusses the history and current status of MathML, solutions and fallbacks.</p>
            </annotation>
        </mixed-citation>
    </ref>
    <ref id="r___1">
        <mixed-citation publication-type="book">
            <person-group person-group-type="author">
                <name>
                    <surname>Bazargan</surname>
                    <given-names>Kaveh</given-names>
                </name>
            </person-group>. &#x201C;
            <article-title>A Complete End-to-End Publishing System Based on JATS</article-title>.&#x201D; In 
            <source>Journal Article Tag Suite Conference (JATS-Con) Proceedings 2015</source>. 
            <conf-name>Journal Article Tag Suite Conference (JATS-Con)</conf-name>. 
            <conf-loc>Bethesda, MD</conf-loc>
            <person-group person-group-type="author">
                <collab>National Center for Biotechnology Information (US)</collab>
            </person-group>, 
            <year>2015</year>. Accessed 14 March 2016. 
            <ext-link ext-link-type="uri" xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="http://www.ncbi.nlm.nih.gov/books/NBK279828/">http://www.ncbi.nlm.nih.gov/books/NBK279828/</ext-link>
            <annotation>
                <p>This paper describes an XML-first workflow for handling math in XML.</p>
            </annotation>
        </mixed-citation>
    </ref>
...
</ref-list>